模式物种基因symbol、​研究进展及同源基因

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  • 张栋

    张栋

    2014年博士毕业于中国农业大学,2014-2017年就职于国内某大型基因公司,任事业部总监岗位,2017年底加入PlantTech。在plant biotechnology journal、Theoretical and Applied Genetics、Plos one上发表多篇文章。
  • Marble

    Marble

    生物信息学硕士,具备多年生物信息分析与研发经验,曾长期担任国内某知名生物测序公司研发经理一职
简  介 模式物种基因symbol、​研究进展及同源基因
模式物种基因symbol、​研究进展及同源基因
 
ID Symbol description
AT5G10140 FLC K-box region and MADS-box transcription factor family protein
AT2G18790 PHYB phytochrome B
AT1G09570 PHYA phytochrome A
AT2G32950 COP1 Transducin/WD40 repeat-like superfamily protein
AT1G65480 FT PEBP (phosphatidylethanolamine-binding protein) family protein
AT2G43790 MPK6 MAP kinase 6
AT1G66340 ETR1 Signal transduction histidine kinase, hybrid-type, ethylene sensor
AT1G64280 NPR1 regulatory protein (NPR1)
 
GENE_ID Pub.ID Time description
AT3G29810 29446495 2019/4/13 12:23 role as part of the complex network of interacting pathways regulating seed mucilage polysaccharide matrix organization
AT4G26080 29288233 2019/4/13 12:22 ABI1 is involved in auxin-triggered lateral root development.ABI1 regulates HSP22 expression.
AT1G25580 29430765 2019/4/13 12:06 identification of target genes and possible role in plant immunity
AT1G55870 29371249 2019/4/13 12:04 At1g55870 (Poly(A) Ribonuclease) role in the mutualistic relationship between Piriformospora indica and Arabidopsis.
AT2G30340 30627888 2019/4/13 11:42 positively regulates lateral root formation
 
Query Subject Identities alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Zm00001d035916_P001 AT5G26667 61.798 178 68 0 16 193 17 194 9.44E-88 257
Zm00001d048284_P001 AT5G21920 55.303 132 20 4 119 226 120 236 3.31E-31 115
Zm00001d036601_P001 AT1G76710 74.576 59 15 0 1 59 441 499 1.32E-27 102
Zm00001d028803_P002 AT2G38440 60.355 169 65 2 1 168 1 168 5.88E-61 228
Zm00001d028803_P002 AT2G38440 27.525 396 209 19 823 1183 1033 1385 3.29E-17 87.4
Zm00001d028803_P001 AT2G38440 56.731 104 43 2 1 103 66 168 1.04E-31 134
Zm00001d028803_P001 AT2G38440 26.515 396 208 20 758 1113 1033 1385 4.63E-13 73.6
Zm00001d027450_P004 AT1G01510 60.983 651 199 17 1 620 10 636 0 714
Zm00001d027450_P007 AT1G01510 58.377 382 135 10 1 369 214 584 1.10E-134 398
Zm00001d027450_P003 AT1G01510 60.55 436 147 11 1 424 214 636 8.00E-167 482
Zm00001d027450_P001 AT1G01510 63.287 651 201 16 1 637 10 636 0 755
Zm00001d027450_P006 AT1G01510 46.038 265 120 9 1 253 317 570

* 课程提供者:PlantTech(普朗泰科)学院